Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDATPNAVELTVDNAWFIAETI----GAGTFPWVLA--ITMPYSDAAQRGAFV---DRQRDELTRMGLLSPQGVINPAVADWIKVVCFPDRWLDLRYVGPASADGACELLRGIVALRTGTGKTSNKTGNGVVALRN---AQLVTFTAM-------DIDDPRALVPILGVGLAHRPPARFDEFSLPTRVGARADERLRSGVPLGEVVDYLGIPASARPVVESVFSGPRSYVEIVAGCNRDGRHTTTEVGLS--IVDTSAGRVLVSPSRAFDGEWVSTFSPGTPFAIAVAIQTLTACLPDGQWFPGQRVSRDFSTQSS---------------- |
| 4X2Z Chain:A ((9-309)) | ----QKTIYLTEDGVKYRSIVLKPGDSLGQFGQVYAKNKIVFTADDVEDKEILYVPTTDKSILEYYGLDAQKYVIYLQTLAQKWNVQYRDNFLILEWR-----DGNCWISSAIVLLQAAKIRFKGFLTEAWAKLLGGDPTDFVAWCYASCTAKVGDFSDANWLLANLA----EHFDADYTNAFLKKRVSCNCG--IKSYELRGLEACIQPVRATNLLHFKTQYSN-------CPTCGANNTDEVIEASLPYLLLFATDGPATVDCDEDAVGTVVFVGSTNSGHCYTQA---------AGQAFDNLAKDRKFGKKSPYITAMYTRFAFKNETS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65126 for 1874 contacts (-34.8/contact) +
2D Compatibility (PS) -28159 + (NN) -12062 + (LL) 2184
1D Compatibility (HY) -8000 + (ID) 2600
Total energy: -113763.0 ( -60.71 by residue)
QMean score : 0.128
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