Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDQRWLIDKSALVRL-TDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGE--------IA-RREFREPPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTERLTHRPPSA
1V8P Chain:A ((27-151))
--AVEYLVDASALYALAAHYDKWIK----H-REKLAILHLTIYEAGNALWKEARLGRVDWAAASRHLKK-VLS-SFKVLE--DPPLDEVLRVAV-------ERGLTFYDASYAYVAESSGLVLVTQDRELLAKTKG-AIDVETL-------
General information:
TITO was launched using:
RESULT:
Template:
1V8P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38092 for 884 contacts (-43.1/contact) +
2D Compatibility (PS) -12486 + (NN) -5002 + (LL) 1292
1D Compatibility (HY) -2000 + (ID) 1500
Total energy: -57788.0 ( -65.37 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_1V8P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V8P-query.scw
PDB file :
Tito_Scwrl_1V8P.pdb
: