Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVSFKMRPAQPR
3ONR Chain:G ((2-71))
VSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVSFKMRPSQP-
General information:
TITO was launched using:
RESULT:
Template:
3ONR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20730 for 421 contacts (-49.2/contact) +
2D Compatibility (PS) -8018 + (NN) -6452 + (LL) 100
1D Compatibility (HY) -9200 + (ID) 3400
Total energy: -47700.0 ( -113.30 by residue)
QMean score : 0.633
(partial model without unconserved sides chains):
PDB file :
Tito_3ONR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ONR-query.scw
PDB file :
Tito_Scwrl_3ONR.pdb
: