Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSPVAVIARFMPRPDARSALRALLDAMITPTRAEDGCRSYDLYESADG-GELVLFERYRSRIALDEHRGSPHYLNYRAQVGELLTRPVAVTVLAPLDEASA
2GFF Chain:A ((1-97))
---MHVTLVEINVKEDKVDQFIEVFRANHLGSIREAGNLRFDVLRDEHIPTRFYIYEAYTDEAAVAIHKTTPHYLQCVEQLAPLMTGPRKKTVFIGLMPG--
General information:
TITO was launched using:
RESULT:
Template:
2GFF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46585 for 636 contacts (-73.2/contact) +
2D Compatibility (PS) -10745 + (NN) -5010 + (LL) 348
1D Compatibility (HY) -5600 + (ID) 1000
Total energy: -68592.0 ( -107.85 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_2GFF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GFF-query.scw
PDB file :
Tito_Scwrl_2GFF.pdb
: