Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFRAPGCAPCDRVRRGVGDVCADLG-DVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVP-KAADLRSALKPLLA
3NOF Chain:B ((24-109))
------------------------------------------------LSSNKPVLVDFWATWCGPSKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFK-DGQPVKRIVGAKGKAALLRE-------
General information:
TITO was launched using:
RESULT:
Template:
3NOF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31096 for 551 contacts (-56.4/contact) +
2D Compatibility (PS) -9128 + (NN) -2816 + (LL) 5296
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -44494.0 ( -80.75 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_3NOF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NOF-query.scw
PDB file :
Tito_Scwrl_3NOF.pdb
: