Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRRRAIQPSPALRIGPIELASPVVLAPMAG--------VTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPVT-----------MH-MTT-FSADESPRSLQLY-----------------------TVDP----------------------DTTYAAARMIAGEGLADHIDMNFGC---------PVPKVTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGID----DAHHTHLDAGRIAEAEGAAAVALHARTAAQRYS----GTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTDPDDCRVPEGADAMGSGG |
| 3HGJ Chain:A ((7-335)) | -----------PLELGGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGG-----VGLILVEATAVEPLGRISPYDLGIWSEDHLPGLKELARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRALRAG-FQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVP-RELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKAL---------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153201 for 2064 contacts (-74.2/contact) +
2D Compatibility (PS) -26468 + (NN) -12246 + (LL) 5788
1D Compatibility (HY) -10400 + (ID) 2100
Total energy: -198627.0 ( -96.23 by residue)
QMean score : 0.389
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