Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGDCPRSRTVRWSWDTGHV--TAEPQPTPRPAKPRLLQDG--RDMFWSLAPLVVG--CILLAGLVG--MCSFQLGGT-----KRGP---------IPSYDAAQALRADAKTLGFPIRLPQLPGGWTPNSGGRGGIENGRADPATGQRRNAATSIVGFISPTGRY--LSLTQSNADE-DKLV--GSIHPS-------MY--PTGTVDVGGTRWVVYEGSD---------ENGAVEPVWTT-------------RLTGPGGATQLA--------------------ITGAGSIDQFRTLASATQSQ----PPLPAR----------------- |
| 2VIU Chain:A ((9-328)) | ---STATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTG-VIQNGGSNACKR--------GPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGIHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKQT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29857 for 1262 contacts (-23.7/contact) +
2D Compatibility (PS) -23865 + (NN) -10522 + (LL) 28
1D Compatibility (HY) -8800 + (ID) 2550
Total energy: -75566.0 ( -59.88 by residue)
QMean score : 0.226
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