Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGWFAHTLRPAMLAAGRSDRLGRIVERSPLTRGVVRRFVPGDTLDDVVDIVTALRDSGRYLSIDYLGENVTDADDAAAAVRAYLGLLDVLGRRGDIACDGVRPLEVSLKLSALGQALDRD----GQKIALDNARAICERAERVGAWVTVDAEDHTTTDSTLSISGDLRVD-----FPWLGTVVQAYLRRTLADCAELA------AVGARVRLCKGAYDEPAS-----------VAYRDAAQVTDSYLRCLRVLTAGRG--YPMVATHDPVIIAAVPGITRESGRSQGDFEYQMLYGVRDDEQRRLTG------AGNHVRVYVPFGTR--WYGYFLRRLAERPANLAFFLRALTDRRRARGCAER |
| 3E2Q Chain:A ((155-485)) | -----------------GEPLIRKGVD--MAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASN-GRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEESDRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQ-NYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRISAPVGTHETLLAYLVRRLLENGANTSFVNRI------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168417 for 2411 contacts (-69.9/contact) +
2D Compatibility (PS) -31523 + (NN) -2779 + (LL) 2664
1D Compatibility (HY) -14800 + (ID) 3950
Total energy: -218805.0 ( -90.75 by residue)
QMean score : 0.441
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