Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFEPGDSVTVVQIDGATAVVFKDV
3GE2 Chain:A ((95-117))
-----------------------------------------------------------------------------------------------------------------------QRMIIGDDVKIYTVNGNQIVVDD--
General information:
TITO was launched using:
RESULT:
Template:
3GE2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7152 for 94 contacts (-76.1/contact) +
2D Compatibility (PS) -2908 + (NN) -3082 + (LL) 10444
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -4998.0 ( -53.17 by residue)
QMean score : 0.744
(partial model without unconserved sides chains):
PDB file :
Tito_3GE2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GE2-query.scw
PDB file :
Tito_Scwrl_3GE2.pdb
: