Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MYERRHERGMCDRAVEMTDVGATAAPTGPIARGSVARVGAAT-------ALAVACVYTVIY-----------LAARDLPPACFSIF--------AVFWGALGIATGATHGL--------LQETTREVRWVRS-------------------TQIVAGHRTHPLRVAGMIGTVAAVVIAGSSPLWSRQLFVEGRWLSVGLLSVGVAGFCAQAT--LLGALAGVDRWTQYGSLMVTDAVIRLAVAAAAVVIGWGLAGYLWAATAGAVAWLLMLMASPTARSAASLLTPGGIATFVRGAAHSITAAGASAILVMGFPVLLKVTSDQLGAKGGAVILAVTLTRA--PLLVPLSAMQGNLIAHFVDRRTQRLRALIAPALVVGGIGAVGMLAAGLTGPWLLRVGFGPDYQTG---------GALLAWLTAAAVAIAMLTLTGAA---------AVAAALHRAYL---------LGWVSATVASTLLLLLPMPLETRTVIALLFGPTVGIAIHVAALARRPD |
| 3J2P Chain:A ((1-495)) | MRCIGISNRDFVEGVSGGSWVDIVLEHGSCVTTMAKNKPTLDFELIETEAKQPATLRKYCIEAKLTNTTTDSRCPTQGEPSLNEEQDKRFVCKHSMVDRGWGNGCGLFGKGGIVTCAMFTCKKNMKGKVVQPENLEYTIVITPHSGEEHAVGNDTGKHGKEIKITPQSSITEAELTGY-GTVTMECSPRTGLDFNEMVLLQ---MENKAWLVHRQWFLDLPLPWLPGADTQGSNWIQKETLV----TFKNPHAKKQDVVVLG--------SQEGAMHTALTGATEIQMSSGNLLFTGHLKCRLR--MDKLQLKGMSYSMCTG---KFKVVKEIAETQHGTIVIRVQYEGDGSPCKIPFEIMDL-------EKRHVLGRLITVNPIVTEKDSPVNIEAEPPFGDSYIIIGVEPGQLKLNWFKKGSSIGQMIETTMRGAKRMAILGDTAWDFGSLGGVFTSIGKALHQVFGAIYGAAFSGVSWIMKILIGVIITWIGMN-SRSTSLSVSLVLVGVVTLYLGVMVQA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J2P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274618 for 2758 contacts (-99.6/contact) +
2D Compatibility (PS) -41417 + (NN) 4202 + (LL) 2388
1D Compatibility (HY) -13200 + (ID) 3450
Total energy: -326095.0 ( -118.24 by residue)
QMean score : 0.020
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