Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADIPYGTDYPDAPWIDRDGHVLIDDGGKPTQVHRGQARIAYRLAERYQ-DKLLHVAGIGWHSWDGRRWAADDR-------GEAKRAVLAELRQALSDSLND-------KELRADVRKCESASGVAG--VLDLAAALVPFAATVADLDSD------------------PHLLNVANGTLDLHT-------LKLRPHAPADRITKICRGAYQSDTESPLW-----QAFLTRVLPDEGVRGFVQRLAGVGLLGT-VREHVLAILIGVGANG-KSVFDKAIRYALGDYACTAEPDLFMHRENAHPTGEMDLRGVRWVAVSESEKDRRLAESTIKRLTGGDTIRARKMRQDFVEFTPSHTPLLITNHLPRVPGDDTAIWRRIRVVPFEVVIPADEQDRELDARLQLEADSILSWAVAGWSDYQRIGLSQPDAVLAATSNYREDSDTIKRFIDDECVTSSPVLKATTTHLFEAWQRWRVQEGVPEISRKAFGQ-SLDTHGYPVTDKARDGRWRAGIAVRGADDFDD |
| 1DPG Chain:A ((1-485)) | V---------------SEIKTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDCIKDFTD--DQAQAEAFIEHFSYRAHDVTDAASYAVLKEAIEEAADKFDIDGNRIFYMSVAPRFFGTIAKYLKSEGLLADTGYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLFRIDHYLGKEMVQNIAALRFGNPIFDAAWNKDYIKNVQVTLSEVLGVEERAGYYDTAGALLDMIQNHTMQIVGWLAMEKPESFTDKDIRAAKNAAFNALKI---YDEAEVNKYFVRAQYGAGDSA----DFKPYLEELDVPADSKNNTFIAGELQFDLPRW--EGVPFYVRSG-KRLAAKQTRVDIVFKAGTFNFGSEQEAQEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKKN-TPEPYERMIHDTMNGDGSNF----ADWNGVSIAWKFVDAISAVYTADKAPLETYKSGSMGPEASDKLLAANGDAWVFKG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DPG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8790 for 3354 contacts (-2.6/contact) +
2D Compatibility (PS) -44688 + (NN) -1769 + (LL) 1396
1D Compatibility (HY) -3600 + (ID) 2750
Total energy: -60201.0 ( -17.95 by residue)
QMean score : 0.129
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