Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAARKCGAPPIAADGSTRRPDCVTAVRTQARAPTQHYAESVARRQRVLTITAWLAVVVTGSFALMQLATGAGGWYIALINVFTAVTFAIVPLLHRFGGLVAPLTFIGTAYVAIFAIGWDVGTDAGAQFFFLVAAALVVLLVGIEHTALAVGLAAVAAGLVIALEFLVPPDTGLQPPWAMSVSFVLTTVSACGVAVATVWFALRDTARAEAVMEAEHDRSEALLANMLPASIAERLKEPERNIIADKYDEASVLFADIVGF----TERASSTAPADLVRFLDRLYSAFDELVDQ---HGLEKIKVSGDSYMVVSGVPRPRPDHTQ------ALADFALDMTNVAAQLKDPRGNPVPLRVGLATGPVVAGVVGSRRFFYDVWGDAVNVASRMESTDSVGQIQVPDEVYERLKD-DFVLRERGHINVKGKGVMRTWYLIGRKVAADPGEVRGAEPRTAGV |
| 1AB8 Chain:B ((5-205)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EE--LYHQSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKTIGSTYMAATGLS--------QYMHIGTMVEFAYALVGKLDAINKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTLGYTCTC-------------TYFV---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119875 for 1179 contacts (-101.7/contact) +
2D Compatibility (PS) -17619 + (NN) -6337 + (LL) 23092
1D Compatibility (HY) -16000 + (ID) 2850
Total energy: -139589.0 ( -118.40 by residue)
QMean score : 0.559
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