Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY
1WWV Chain:A ((1-91))
GSSGSSGMEPVETWTPGKVATWLRGLDDSLQDYPFEDWQLPGKNLLQLCPQSLEALAVRSLGHQELILGGVEQLQALSSRLQTENSGPSSG----
General information:
TITO was launched using:
RESULT:
Template:
1WWV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1551 for 538 contacts (-2.9/contact) +
2D Compatibility (PS) -9214 + (NN) -3013 + (LL) 544
1D Compatibility (HY) 2000 + (ID) 650
Total energy: -11884.0 ( -22.09 by residue)
QMean score : 0.376
(partial model without unconserved sides chains):
PDB file :
Tito_1WWV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WWV-query.scw
PDB file :
Tito_Scwrl_1WWV.pdb
: