Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASDLYLGYRNDDADTPFGKFFKPEMAPLPQHVVVALQHGPQAGMALLAFDDAASIVDEGYQQTENGYGILGDGSMQVSVRTDMPGVTPAMWAWWFGWHGSDTRRYKLWHPRAHLSARWKDGDQDSGAGRRGAQRYVGRWSMISEYIGSTKLGAAIQFVEPAAMGLPDDSDDTVSICARLGSADAPVDAGWFVHQVRSTPGGSEMRSRFWMGGPHIAVRKAPEVASKAVRPIASKLIGVSESTARNLLVYCAQEMNHLAGFLADLWESFGDE |
| 4MT5 Chain:A ((0-183)) | M-QTAYVKYVDDTTGE------TLRQDDLHGYTDETIPYSTAEGIKKYEGD--------GYVLVSDGFK---------------PGTKFGV--------GTPTYEVHFKHGMTHTDA------TDKNA-------------------EQKTVTETIHYVDENNQTVQPDSTTAVTFKRGYTTDNVT---GKVVSYDPWTVDGNQADSKTFAAVP----SPAVEGYTPNHQQINEFTVTPDSKDIVKTVVYVGDP------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 34245 for 1199 contacts (28.6/contact) +
2D Compatibility (PS) -18551 + (NN) 2688 + (LL) 5848
1D Compatibility (HY) 8800 + (ID) 400
Total energy: 32630.0 ( 27.21 by residue)
QMean score : -0.019
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