Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQTLTVADFALRLAVGVGCGAIIGLERQWRARMAGLRTNALVATGATLFVLYAVATEDSSPTRVASYVVSGIGFLGGGVILREGFNVRGLNTAATLWCSAAVGVLAASGHLVFTLIGTGTIVAVHLLGRPLGRLVDRDNAVEDEGLQPYQVRVICRPKAETYVRAHIVQRTSSNDITLRGIRTGPAGD-DNITLTAHLLMVGHTPAKLERLVAELSLQPGVYAVHWYAGEHAQAE |
3LOU Chain:A ((10-88)) | ---------------------------------------------------------------------------------------------------------------------------------------------------QFVLTLSCPS--AAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHA--TD-LRVDALRREFEPIAERFRMQWA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LOU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46832 for 477 contacts (-98.2/contact) +
2D Compatibility (PS) -7920 + (NN) -2334 + (LL) 11588
1D Compatibility (HY) -3600 + (ID) 300
Total energy: -49398.0 ( -103.56 by residue)
QMean score : 0.327
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