Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYSGVVSRTNIEIDDELVAAAQRMYRLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFDFSNDEIESFSDTDRKLADES
4CHG Chain:G ((41-69))
----------------------------------------LVGEPLGRDEALALQGSGFDFSNDEIESF-----------
General information:
TITO was launched using:
RESULT:
Template:
4CHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -649 for 101 contacts (-6.4/contact) +
2D Compatibility (PS) -3279 + (NN) -2171 + (LL) 3932
1D Compatibility (HY) -3600 + (ID) 1450
Total energy: -7217.0 ( -71.46 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_4CHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CHG-query.scw
PDB file :
Tito_Scwrl_4CHG.pdb
: