Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQQSLAVKTFEDLFAELGDRARTRPADSTTVAALDGGVHALGKKLLEEAGEVWLAAEH----ESNDALAEEISQLLYWTQVLMISRGLSLDDVYRKL
5IE9 Chain:A ((26-91))
------------------------------------SPLAMMARLTEEMGELAREVNHYYGE---RSIEEELGDVLFVMICMANSLNIDLETAHNI-
General information:
TITO was launched using:
RESULT:
Template:
5IE9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8418 for 278 contacts (-30.3/contact) +
2D Compatibility (PS) -6068 + (NN) -6200 + (LL) 2772
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -20514.0 ( -73.79 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_5IE9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5IE9-query.scw
PDB file :
Tito_Scwrl_5IE9.pdb
: