Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGQIVAGEIGGQRTTPVGGGLPLACCLDGRPPIVPHRRRRRIAALRSVLRMRDTPRPARSRCDQVTSHAVLIGWRAVPRRHGGELPRRGALALGCIALLLMGIVGCTTVTDGTAMPDTNVAPAYRSSVSASVSASAATSSIRESQRQQSLTTKAIRTSCDALAATSKDAIDKVNAYVAAFNQGRNTGPTEGPAIDALNNSASTVSGSLSAALSAQLGDALNAYVDAARAVANAIGAHASTAEFNRRVDRLNDTKTKALTMCVAAF |
| 1Y1V Chain:D ((4-221)) | -----------------------------STSTFQTRRRRL-------------KKVEEEE-------------NAATLQLGQEFQLK------------------QINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQKKTREKELESIDVLLEQTTGGNNKDLKNTMQYLTNFSR-----FRDQETVGAVIQLLKSTG--LHPFEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5950 for 1098 contacts (5.4/contact) +
2D Compatibility (PS) -18395 + (NN) -5806 + (LL) 5472
1D Compatibility (HY) -1600 + (ID) 1300
Total energy: -15679.0 ( -14.28 by residue)
QMean score : 0.367
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