Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVAMLFYVDTLPDTGAVAVVDGDEGFHAATVRRIRPGEQLVLGDGVGRLARCVVEQAGRGGLRARVLR-RWSVPPVRPPVTVVQALPKSERSELAIELATEAGADAFLAWQAARCVANWDGARVDKGLRRWRAVVRSAARQSRRARIPPVDGVLSTPMLVQRVREEVAAGAAVLVLHEEATERIVDIAAAQAGSLMLVVGPEGGIAPDELAALTDAGAVAVRLGPTVLRTSTAAAVALGAVGVLTSRWDASASDCEYCDVTRR |
1Z85 Chain:A ((22-232)) | -------------QNGEVIFDEREAHHM-RVVRLKEGDVIEATDGNGFSYTCILKSLKKKTAAAKIVKVEEKEKEPTEKLSVVVPIGRWERTRFLIEKCVELGVDEIFFHKFERSQHE-------ISLDKAKIVVREAAKQCKRYLFPKVSFLEKLEF----S-------GNVITLDL---QNLLD--ANLEGSITVVVGPEGGFSEKERELLRSST-TIV------LRFETAAILTVGYIALKKQ----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Z85.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -101362 for 1475 contacts (-68.7/contact) +
2D Compatibility (PS) -21370 + (NN) -5426 + (LL) 4908
1D Compatibility (HY) -8000 + (ID) 2650
Total energy: -133900.0 ( -90.78 by residue)
QMean score : 0.363
|
|
|