Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGGTFDPIHYGHLVAASEVADLFDLDEVVFVPSGQPWQKGRQVSAAEHRYLMTVIATASNPRFSVSRVDIDRGGPTYTKDTLADLHALHPDSELYFTTGADALASIMSWQGWEELFELARFVGVSRPGYELRNEHITSLLGQLAKDALTLVEIPALAISSTDCRQRAEQSRPLWYLMPDGVVQYVSKCRLYCGACDAGARSTTSLAAGNGL
4S1O Chain:B ((10-201))
MGGTFDPIHYGHLVAASEVADLFDLDEVVFVPSGQP------VSAAEHRYLMTVIATASNPRFSVSRVDIDRGGPTYTKDTLADLHALHPDSELYFTTGADALASIMSW--WEELFELARFVGVSRPG------------------ALTLVEIPALAISSTDCRQRAEQSRPLWYLMPDGVVQYVSKRRLYT-------------------
General information:
TITO was launched using:
RESULT:
Template:
4S1O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143754 for 1310 contacts (-109.7/contact) +
2D Compatibility (PS) -18318 + (NN) -10739 + (LL) 2144
1D Compatibility (HY) -23200 + (ID) 8200
Total energy: -202067.0 ( -154.25 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_4S1O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4S1O-query.scw
PDB file :
Tito_Scwrl_4S1O.pdb
: