Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPVVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILIDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVLVAPVSPSTASSRTDT
4XXX Chain:A ((126-274))
---NFMDLKEAARKLETGDQGASLAHFADGWNTFNLTLQGDVKRFR-----GFDNWEGDAATACEASLDQQRQWILHMAKLSAAMAKQAQYVAQLHVWARREHPTYEDIVGLERLYAE---------NPSARDQILPVYAEYQQRSEKVLTEYNNKA-----ALEPVNPPK-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4XXX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24676 for 904 contacts (-27.3/contact) +
2D Compatibility (PS) -16233 + (NN) -9678 + (LL) 2564
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -50173.0 ( -55.50 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_4XXX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XXX-query.scw
PDB file :
Tito_Scwrl_4XXX.pdb
: