Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAFGVEPYGQPKYLEIAGKRMAYIDEGKGDAIVFQHGNPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIV-TPMTWADWPPAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINAEPGAIITGRIRDYVRSWPNQTEITVPGVHFVQEDSPEEIGAAIAQFVRRLRSAAGV |
4C6H Chain:A ((7-284)) | ----------KKKFATVHGKQMAYIEEGTGDPIVFLHGNPMSSYLWRNIMPHLAGKGRLIAPDLIGMGDSDKLDNSGPDSYTFAEHCTYLFALLEQLGVTENVTLVIHDWGSGLGFHWAHTHSDAVKGIAFMEAIVETRESWDAFPERAREMFQALRSPAGEEMVLEKNLFVEALVPGSILRDLTEEEMNEYRRPFANAGEDRRPTLTFPRQVPIEGQPKDVTELVDAYVDWLGQTSIPKLFINADPGVLITGEVRDRVRSWPNLTEVTVAGLHFIQEDSPDEIGAAV------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172655 for 2392 contacts (-72.2/contact) +
2D Compatibility (PS) -28874 + (NN) -8538 + (LL) 1784
1D Compatibility (HY) -31200 + (ID) 8650
Total energy: -248133.0 ( -103.73 by residue)
QMean score : 0.449
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