Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDLITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV
1U8R Chain:C ((1-230))
MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLDELGVG---------LVRLTELPAGSPVAVVVRQLTEHVQGDIDLITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV
General information:
TITO was launched using:
RESULT:
Template:
1U8R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106401 for 1766 contacts (-60.2/contact) +
2D Compatibility (PS) -24520 + (NN) -11756 + (LL) -292
1D Compatibility (HY) -30000 + (ID) 11000
Total energy: -183969.0 ( -104.17 by residue)
QMean score : 0.866
(partial model without unconserved sides chains):
PDB file :
Tito_1U8R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U8R-query.scw
PDB file :
Tito_Scwrl_1U8R.pdb
: