Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMGHTIVMGRRTWDSLPAKVRPLPGRRNVVLSRQADFMASGAEVVGSLEEALTSPETWVIGGGQVYALALPYATRCEVTEVDIGLPREAGDALAPVLDETWRGETGEWRFSRSGLRYRLYSYHRS
4M2X Chain:E ((4-162))
MVGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMGHTIVMGRRTWDSLPAKVRPLPGRRNVVLSRQADFMASGAEVVGSLEEALTSPETWVIGGGQVYALALPYATRCEVTEVDIGLPREAGDALAPVLDETWRGETGEWRFSRSGLRYRLYSYHRS
General information:
TITO was launched using:
RESULT:
Template:
4M2X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89426 for 1224 contacts (-73.1/contact) +
2D Compatibility (PS) -16950 + (NN) -6233 + (LL) 0
1D Compatibility (HY) -21200 + (ID) 7950
Total energy: -141759.0 ( -115.82 by residue)
QMean score : 0.843
(partial model without unconserved sides chains):
PDB file :
Tito_4M2X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M2X-query.scw
PDB file :
Tito_Scwrl_4M2X.pdb
: