Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFLRGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLRTDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLADRDSIFEYTYEDIVVKNYDPHPAIKAPVAV
3QJ7 Chain:B ((2-261))
MTPYEDLLRFVLETGTPKS---GTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFLRGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLRTDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLADRDSIFEYTYEDIVVKNYDPHPAIKAP---
General information:
TITO was launched using:
RESULT:
Template:
3QJ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -192144 for 2016 contacts (-95.3/contact) +
2D Compatibility (PS) -27875 + (NN) -16380 + (LL) 604
1D Compatibility (HY) -38400 + (ID) 12850
Total energy: -287045.0 ( -142.38 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_3QJ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QJ7-query.scw
PDB file :
Tito_Scwrl_3QJ7.pdb
: