Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRRRLAIVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPHPMEVVYPGSHPAQLTTLTRRAELVQDLGIEVFLVMPFTTDFMKLTPDRFIHELLVEHLHVVEVVVGENFTFGKKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALGRPHRVEGVVVRGEGRGA-ELGFPTANVAPPMYSAIPADGVYAAWFTVL-GHGPVTGTVVPGERYQAAVSVGTNPTFSGRTRTVEAFVLDTTADLYGQHVALDFVGRIRGQKKFESVRQLVAAMGADTERARDLLSTG |
| 5A89 Chain:B ((4-137)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HFYVTGPVVRGAGRGGKELGFPTANQYFHDTVALPADGVYAGWLTILPTEAPVSGNMEPEVAYAAAISVGTNPTFGDEQRSVESFVLDRDADLYGHDVKVEFVDHVRAMEKFDSVEQLLEVMAKDVQKTRTLLA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A89.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74759 for 980 contacts (-76.3/contact) +
2D Compatibility (PS) -14183 + (NN) -6568 + (LL) 14868
1D Compatibility (HY) -12400 + (ID) 3500
Total energy: -96542.0 ( -98.51 by residue)
QMean score : 0.531
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