Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIRESIAEADADIASGRTYGEDEIRAEFGVPRRPH
3D55 Chain:A ((1-68))
-MSISASEARQRLFPLIEQVNTDHQPVRITSRA-GDAVLMSADDYDAWQETVYLLRSPENARRLMEAVAR-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3D55.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23072 for 362 contacts (-63.7/contact) +
2D Compatibility (PS) -7346 + (NN) -1059 + (LL) 1372
1D Compatibility (HY) -5200 + (ID) 950
Total energy: -36255.0 ( -100.15 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_3D55.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D55-query.scw
PDB file :
Tito_Scwrl_3D55.pdb
: