Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLNPPKPQAAGRYRVQPSGKGGLRPGVDLSSNAALAEAMNDGVSVDAVR
2KEL Chain:A ((15-54))
-VFGIYMDKDLKTRLKVYCAKNNLQLTQAIEEAIKEYLQKR--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KEL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6390 for 193 contacts (-33.1/contact) +
2D Compatibility (PS) -4799 + (NN) -6070 + (LL) 1924
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -18135.0 ( -93.96 by residue)
QMean score : 0.645
(partial model without unconserved sides chains):
PDB file :
Tito_2KEL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KEL-query.scw
PDB file :
Tito_Scwrl_2KEL.pdb
: