Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MNEALIGLAFAAGLVA-----ALNPCGFA-MLPAYLLLVVYGQDSAGRTGPLSAVGRAAAATVGMALGFLTVFGIFGALTISAATAVQRY-LPYATVLIGLALIAL-GGWL-LLGRGLTALTPRSL---GVRWA-PTVRLGSMYGYGISYAVASLSCTIGPFLAVTGAGLRGGSVV----GSVAIYLAYVA-GLTLVVGVLAVAAATASSALADRLRR---------ILPFV-NRISGA-----LLVVVGLYVGYYGLYELRLIAGVGA-NPQDAVIAAA----GR------------------------LQGALAGWVNQHGAWPWAVLLVVLVVGAFAGTWFRRVRR------------ |
| 3BPT Chain:A ((2-363)) | TDAAEEVLLGKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEK--AKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMRGHDFHEGVRAVLIDKDQSPKWKPADLKEVTEEDLNNHFKSLGSSDLKFAENLYFQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -242651 for 2210 contacts (-109.8/contact) +
2D Compatibility (PS) -28949 + (NN) 3281 + (LL) 336
1D Compatibility (HY) -1200 + (ID) 2650
Total energy: -271833.0 ( -123.00 by residue)
QMean score : 0.165
|
|
|