Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAPDVRLTAWVHGWVQGVGFRWWTRCRALELGLTGYAANHADGRVLVVAQGPRAACQKLLQLLQGDTTPGRVAKVVADWSQSTEQITGFSER
2BJD Chain:B ((15-99))
------RMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEVEKVDYSFSEYKGEFEDFE--
General information:
TITO was launched using:
RESULT:
Template:
2BJD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58550 for 636 contacts (-92.1/contact) +
2D Compatibility (PS) -9508 + (NN) -4893 + (LL) 504
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -81747.0 ( -128.53 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_2BJD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BJD-query.scw
PDB file :
Tito_Scwrl_2BJD.pdb
: