Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEVLVLVEHAEGALKKVSAELITAARALGEP-AAVVVGVPGTAAP-LVDGLKAAGAAKIYVAESDLVDKYLITPAVDVLAGLAESSAPAGVLIAATADGKEIAGRLAARIGSGLLVDVVDVREGGVGVHSIFGGAFTVEAQANGDTP-VITVRAGAVEAEPAA-G--AGEQVSVEVPAAAENAARITAREPAVAGDRPELTEATIVVAGGRGVGSAENFSVVEALADSLGAAVGASRAAVDSGYYPGQFQVGQTGKTVSPQLYIALGISGAIQHRAGMQTSKTIVAVNKDEEAPIFEIADYGVVGDLFKVAPQLTEAIKARKG |
| 1EFV Chain:A ((2-313)) | -QSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTK--CDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDE-KVKVFSVRGTSFDAAATSGGSASSEKASST---SPVEISEWLDQKLTKS-DRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEILK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199370 for 2605 contacts (-76.5/contact) +
2D Compatibility (PS) -32861 + (NN) -9536 + (LL) 172
1D Compatibility (HY) -22800 + (ID) 6400
Total energy: -270795.0 ( -103.95 by residue)
QMean score : 0.589
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