Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSTSIPTFPFDRPVPTEPSPMLSELRNSCPVAPIELPSGHT-AWLVTRFDDVKGVLSDKRFSCRAAAHPSSPPFVP-FVQLCPSLLSIDGPQHTAARRLLAQGLNPGFIARMRPVVQQIVDNALDDLAAAEPPVDFQEIVSVPIGEQLMAKLLGVEPKTVHELAAHVDAAMSVCEIGDEEVSRRWSALCTMVIDILHRKLAEPGDDLLSTIAQA-NRQQSTMTDEQVVGMLLTVVIGGVDTPIAVITNGLASLLH----HRDQYERLVEDPGRVARAVEEIVRFNPATEIEHL-RVVTEDVVIAGTALSAGSPAFTSITSANRDSDQFLDPDEFDVERNPNEHIAFGYGPHACPASAYSRMCLTTFFTSLTQRFPQLQLARPFEDLERRGKGLHSVGIKELLVTWPT |
| 2D0E Chain:A ((28-404)) | --------------------PVLTELMREGPVTRISLPNGEGWAWLVTRHDDVRLVTNDPRFGREAVMDRQVTRLAPHFIPARGAVGFLDPPDHTRLRRSVAAAFTARGVERVRERSRGMLDELVDAMLRAGPPADLTEAVLSPFPIAVICELMGVPATDRHSMHTWTQLILSSSH-GAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEITLS--EAVGLAVLLQIGG-----EAVTNNSGQMFHLLLSRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFK-KGALIRGPEALPVTW-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D0E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271168 for 2991 contacts (-90.7/contact) +
2D Compatibility (PS) -39436 + (NN) -21204 + (LL) 624
1D Compatibility (HY) -15200 + (ID) 6100
Total energy: -352484.0 ( -117.85 by residue)
QMean score : 0.560
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