Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANEPAIGAIDRLQRSSRDVTTLPAVISRWLSSVLPGGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTG---DVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWVRSWYDFAVEG-----IGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTGVELGDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH |
| 2PPQ Chain:A ((8-262)) | ----------------------TEDELRNFLTQ-YDVG--SLTSYK--GIAE---NSNFLLHTT--------KDPLILTLYEK--------KNDLPFFLGLMQHLAA-KGLSCPLPLPRKDGELLGELSGRPAALISFLEGMWLRKP-------------EAK----HCREVGKALAAMHLASEGFEIKR-PNA---------LSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK---DLPAGVIHADLFQDNVFFLGDELSGLIDFYFACNDLLAYDVSICLNAWCFEKD-----GAYNVT---KGKALLEGYQSVRPLSEAEL---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97685 for 1711 contacts (-57.1/contact) +
2D Compatibility (PS) -26085 + (NN) -10798 + (LL) 9320
1D Compatibility (HY) -9200 + (ID) 1650
Total energy: -136098.0 ( -79.54 by residue)
QMean score : 0.423
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