Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSLAERTVLVTGANRGMGREYVAQLLGRKVAKVYA-ATRNPLAIDVSD---PRVIPLQLDVTDAVSVAEAADLATD----VGILINNAGISRASSVLDKDTSALRGELETNLFGPLALASA-FADRIAERSGAIVNVSSVLAWLPLG--MSYGVSKAAMWSATESMRIELAPRGVQVVGVYVGLVDTDMGRFADAPKSDPADVVRQVLDGIEAGKEDVLADEMSRQVRASLNVPARERIARLMGN
3RRO Chain:B ((9-197))
--NLEGKVALVTGASRGIGKA-IAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3RRO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77245 for 1379 contacts (-56.0/contact) +
2D Compatibility (PS) -19388 + (NN) -6104 + (LL) 4064
1D Compatibility (HY) -11200 + (ID) 3250
Total energy: -113123.0 ( -82.03 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_3RRO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RRO-query.scw
PDB file :
Tito_Scwrl_3RRO.pdb
: