Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTWPAPTAPTPVRATVTVPGSKSQTNRALVLAALAAAQGRGASTISGALRSRDTELMLDALQTLG----LRVDGVGSELTVSGRIEPGPGA-RVDCGLAGTVLRFVPPLAA---LGSVPVTFDGDQQARGRPIAPLLDALRELGVAV---DGTGLPFRVRGNGSLAGGTVAIDASASSQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDSTPNRWQVRPGPVAAR--RWDIEPDLTNAVAFLSAAVVSGGTVRITGWPRVSVQPADHILAILRQLNAVVIHADSSLEV-RGPTGYDGFDVDLRAVGELTPSVAALAALASPGSVSRLSGIAHLRGHETDRLAALSTEINRLGGTCRETPDGLVIT-ATPLRPGIWRAYADHRMAMAGAIIGLRVAGVEVDDIAATTKTLPEFPRLWAEMVGPGQGWGYPQPRSGQRARRATGQGSGG |
1Q36 Chain:A ((12-416)) | ------------VDGTINLPGSKSVSNRA----LLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMR---PLAAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYP-PLRLQGGFTGGNVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGD-LVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYISCTRGE--LNAIDMDMNHIPAAAMTIATAALFAK--GTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDY----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213648 for 3596 contacts (-59.4/contact) +
2D Compatibility (PS) -42352 + (NN) -21625 + (LL) 1240
1D Compatibility (HY) -25600 + (ID) 6700
Total energy: -308685.0 ( -85.84 by residue)
QMean score : 0.464
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