Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQ------WDITD-PAAAERIIRHG-DVVINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDF-VAVMRRLAAGHGRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLPSTRD |
| 2GGS Chain:B ((2-238)) | ------RTLITGASGQLGIELSRLLSERHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKGN-----YKEEDIPNPINYYGLSKLLGETFALQ--DDSLIIRTSGIF---RNKGFPIYVYKTLK--EGKTVFAFKGYYSPISARKLASAILELLELRKTG-IIHVAGER-ISRFELALKIKEKFNL-PGEVKEVDEVR------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119022 for 1821 contacts (-65.4/contact) +
2D Compatibility (PS) -24969 + (NN) -9574 + (LL) 3684
1D Compatibility (HY) -15200 + (ID) 4100
Total energy: -169181.0 ( -92.91 by residue)
QMean score : 0.454
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