Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDRDRLRPPLDERSLRDQLIGAGSGWRQLDVVAQTGSTNADLLARAASGADIDGVVLIAEHQTAGRGRHGRGWAATARAQIILSVGVRVVDVPVQAWGWLSLAAGLAVLDSVAPLIAVPPAETGLKWPNDVLARGGKLAGILAEVAQPFVVLGVGLNVTQAPEEVDPDATSLLDLGVAAPDRNRIASRLLRELEARIIQWRNANPQLAADYRARSLTIGSRVRVELPGGQDVVGIARDIDDQGRLCLDVGGRTVVVSAGDVVHLR
4XTZ Chain:B ((8-270))
---RDRLRPPLDERSLRDQLIGAGSGWRQLDVVAQTGSTNADLLARAASGADIDGVVLIAEHQTAGRGRHGRGWAATARAQIILSVGVRVVDVPVQAWGWLSLAAGLAVLDSVAPLIAV--AETGLKWPNDVLARGGKLAGILAEVAQPFVVLGVGLNVTQAPEEVDPDATSLLDLGVAAPDRNRIASRLLRELEARIIQWRNANPQLAADYRARSLTIGSRVRVELPGGQDVVGIARDIDDQGRLCLDVGGRTVVVSAGDVVHLR
General information:
TITO was launched using:
RESULT:
Template:
4XTZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154912 for 2193 contacts (-70.6/contact) +
2D Compatibility (PS) -28809 + (NN) -19134 + (LL) -96
1D Compatibility (HY) -34000 + (ID) 13050
Total energy: -250001.0 ( -114.00 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_4XTZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XTZ-query.scw
PDB file :
Tito_Scwrl_4XTZ.pdb
: