Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLPADPSPTLSAYAHPERLVTADWLSAHMG----APGLAIVESDED-------VLLYDVGHIPGAVKIDWHTDLNDP--RVRDYINGEQFAELMDRKGIARDDTVVIYGDKS--NWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDVLAIL--GAQPLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDF--INPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGEEPGVVPVV |
| 1RHS Chain:A ((6-286)) | ----------------YRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKA--TLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPE----PDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPLIAT-RKGVTACHIALAA-YLCGKPDVAIYDGSWFEWFHR-APPET----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117436 for 2172 contacts (-54.1/contact) +
2D Compatibility (PS) -28418 + (NN) -18927 + (LL) 1680
1D Compatibility (HY) -12400 + (ID) 3650
Total energy: -179151.0 ( -82.48 by residue)
QMean score : 0.469
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