Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGAIMLDGKATRDEIFGDLKQRVAALD--AAGRTPGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTNLGRLVL--GTPAPLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT--RDLPALTRQADIVVAAVGVAHLLTADMVRPGAAVIDVGVSRTDD-------GLVGDVHPDV-WELAGHVSPNPGGVGPLTRAFLLTNVVELAERR |
| 4CJX Chain:B ((25-314)) | --AVVIDGRAVAKAIQKELTEEVALLERRYKGRRPGLSTIICGKRKDSQTYVRLKRKAAAACGFRNFSVELPANVTQEALEREVIRLNEEEACHSIVVQLPLPPHIDKVAALSKIKPEKDADCLLPVNVGQLHIRERNPAIVPCTASAVMELLRCSGVEICGKRVVVLGRGDIAGLPVATLLA--NEDATVTVVHSATPLCDIADIVRASDIVVSAAGQPGLVRGEWIKLGAAVIDVGTTPVADPSKVPGYRLVGDVCFDVARKRAAYITPVPGGVGPVTVSMLLKNTLTMFKR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185856 for 2406 contacts (-77.2/contact) +
2D Compatibility (PS) -29241 + (NN) -8815 + (LL) 336
1D Compatibility (HY) -25200 + (ID) 5900
Total energy: -254676.0 ( -105.85 by residue)
QMean score : 0.528
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