Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGGVLTLDAAFLGSVPADLGKALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGVAILLG--------DALHATAVRILTGLTDECVAVRAIRR-LQMSCLDLCIGQFEDCLLEGQ-PEVTVDDYLRMAAGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVA-ALNSRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCA---DERIQAAIAALPDAVRSPDLIALSQLICRREC |
4GP2 Chain:B ((43-320)) | ------------------------------------------------------------------TGGKRLRPLLTLAAAEAVSGQWRPALPAAAIVELIHNYSLIYDDIIDRGDVRRGLPTVRKAFGDNAAILVGIWYREAIEEAVLDTPKPTLFA-KEVAEVIKAIDEGERLDILFEAAGRSDPYFVQARWREVTLDDYIKMVSLKTGALIAAAAKWGVLSVSDDRGLAEAAWNFGMAAGVAFQIIDDVLDIYGD------EIGKDIKEHKRGNAVVAVALSHLGEGERRRLLEILAREVVEEADVREAVALLDSVGAREEALRLAARYREEAERHLAKIPN------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132608 for 2086 contacts (-63.6/contact) +
2D Compatibility (PS) -28133 + (NN) -21468 + (LL) 5944
1D Compatibility (HY) -11600 + (ID) 4300
Total energy: -192165.0 ( -92.12 by residue)
QMean score : 0.451
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