Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQDVVDEILAAGGQAVADGSDISDWDQAANLIQAAVETYGGVDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAASHWRGLSKAGKAPKDIDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVGAAEMRRYGVTVNAIAPAARTRMTETVFAEMMAKPQEGFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEG-GIIRVAEGWAHGPQVDKGVKWDPAELGPVVSDLLAKSRPPVPVYGA |
4KZP Chain:D ((24-306)) | ---LSGKVAVVTGAAAGLGRAEAIGLAKAGATVVVNDIAGALEGS---------DVLDEIAAAGSKGVAVAGDISQRSTADELVETA-EGLGGLDIVVNNAGITRDRILFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRSKAKAGDGT--VYGRVINTSSEAGLSGPVGQPNYGAAKAGITALTLSAARALERFGVRANAIAPRARTAMTAGVFGDAP-----QMDPLSTDHVVTLVQFLAAPASEGVNGQLFIVYGPSVTLVAAPTAEKQFVADEDAWEPADLSVTLRDYFADRDP------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -108730 for 2277 contacts (-47.8/contact) +
2D Compatibility (PS) -29994 + (NN) -9778 + (LL) 864
1D Compatibility (HY) -21200 + (ID) 6900
Total energy: -175738.0 ( -77.18 by residue)
QMean score : 0.515
|
|
|