Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILG-HRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG
2XWL Chain:B ((4-218))
--------VAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGGEDSVIVSGGVDRTESVALAL---EAAGDAEFVLVHDAARALTPPALIARVVAALKEGHSAVVPGLAPADTIKAVDANGAVLGTPERAGLRAVQTPQGFHADVLRRAYARAT----AGGVTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVL--
General information:
TITO was launched using:
RESULT:
Template:
2XWL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152158 for 1777 contacts (-85.6/contact) +
2D Compatibility (PS) -23621 + (NN) -13496 + (LL) 1356
1D Compatibility (HY) -22400 + (ID) 6950
Total energy: -217269.0 ( -122.27 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_2XWL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XWL-query.scw
PDB file :
Tito_Scwrl_2XWL.pdb
: