Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVLPACRLGLVVCVATAVITATMVLATPSYACACGAAVTAHGSQATLNHEVALLHWDGTTETIVMQLAMNADTDNVALVVPTPTPAIVTTADQSTFGEL-DTLSAPLIEHQRHWSLRRGV--GASGPQEAAARAPHVLNQVRLGPLEA-TTLTGGDLSGLQTWLSDNG---YAIRPAVSAALDPYVRDGWAFVAIRLTSTDLIVGGLDPVRMTFRSSRLVYPMRLSVA----AQEPQHVTIFTLSDHRQQRTDADAATQTTHVRFAGDMSTAVRDPLLRELIGNHGSYLTKVEVDIYQTSRISSDFTFG--NAPNDDPYRQVVTVYDDVALPPLLLVVVSAIAVGAAGGAVVVVLRRRRRAHTG |
| 2YN5 Chain:A ((1-283)) | ------------TPPNAPVVTYSDIV---------NDLIIMQGTAEA-KSQLIITDSEGNTYTLTVP-----DNGKWSMAIPYPSEGKFTITSVDAIGNRSDDVPLDIMKEVPVISLSPDSDSGTVGDNITRDKQP----TFIIGNLESDVVVVQVDINGTVYNAEKNADGVWFFTPGTPLA------DGSYTISVIASDAAGNQKNSLPITVTIDSTLTVPEIALAAGEDNGASDSDNVTNHTQPKFTLQHIDADVTGVTVNVTHNG-------------------------VTDIYQATQGADGWTFTPPAAWNDGNYTLSVTVVDRAG-------------NSQQSASLAVTVDS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73046 for 1913 contacts (-38.2/contact) +
2D Compatibility (PS) -28914 + (NN) -7751 + (LL) 6528
1D Compatibility (HY) -4400 + (ID) 2900
Total energy: -110483.0 ( -57.75 by residue)
QMean score : 0.153
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