Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSGIQQNTLMDNDPLAHGYYVADLLVALAVVVLMLRARRTRPELARMLLLGTLIGLVWELPVFGLSAWTNTPIIEWATPLPLPTVVFLLAHSVWDGPLLTMGWLLARALTGEPAGALGLTVQVLWGQLTALAVELSAILAGTWSYVDDLWFNPVM---FWFRGHPVTAAMQLTWLLAPLCFAALVRRLALTAR |
| 4AK8 Chain:B ((84-117)) | ----------------------------------------------------------------------------------------------------------------------------------------KAGMEGDWSWVDDTPFNKVQSARFWIPGEPNNAG------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AK8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5385 for 105 contacts (-51.3/contact) +
2D Compatibility (PS) -3013 + (NN) 281 + (LL) 14912
1D Compatibility (HY) -1600 + (ID) 750
Total energy: 4445.0 ( 42.33 by residue)
QMean score : -0.180
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