Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNQRQYPRTPLKCRIRISHPLFGELMAQTRDLSDTGVYVKHPDLTQLPTGSVVTGQVQDLPIDAPILQMEVVRVDAEGVGLRFLSEA
1GCC Chain:A ((1-63))
----KHYRG--------VRQRPWGKFAAEIRDPAKNG-------------ARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRV
General information:
TITO was launched using:
RESULT:
Template:
1GCC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11753 for 403 contacts (-29.2/contact) +
2D Compatibility (PS) -6502 + (NN) -1332 + (LL) 1588
1D Compatibility (HY) -800 + (ID) 600
Total energy: -19399.0 ( -48.14 by residue)
QMean score : 0.146
(partial model without unconserved sides chains):
PDB file :
Tito_1GCC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GCC-query.scw
PDB file :
Tito_Scwrl_1GCC.pdb
: