Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISSFRAQCAARVVREGGVIAYPTEAVWGLGCDPWNEDAVYRLLALKARPVEKGLIVVAANIHQLDFLLEDLPDVWLDRLAGTWPGPNTWLVPHQ-ERLPEWVTGVHDSVAVRVTDHPLVQELCHLTG-PLISTSANPAGRPAARTRLRVEQYFHDELDAIL-GGALGGRRNPSLIRDLVTGQVIRPA
3TTC Chain:A ((112-285))
----AALQAAIAQLKMGNIVAIKGIGGFHLACDARNSNAVATLRARKHRP-AKPLAVMLPVADGLP-------DAARQLLTT-PAAPIVLVDKKYVPELCDDIAPGLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALEDLQGIADGFLIHNRDIVQRMDDSVVRESG-EMLRRS
General information:
TITO was launched using:
RESULT:
Template:
3TTC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80430 for 1320 contacts (-60.9/contact) +
2D Compatibility (PS) -18695 + (NN) -13995 + (LL) 976
1D Compatibility (HY) -2000 + (ID) 2000
Total energy: -116144.0 ( -87.99 by residue)
QMean score : 0.444
(partial model without unconserved sides chains):
PDB file :
Tito_3TTC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TTC-query.scw
PDB file :
Tito_Scwrl_3TTC.pdb
: