Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLSIYQASIPTFLRTLGNLSAILKKAAAHAEAKNIDPRIFIDARLAPDMFPLARQVQIASDAAKGAGARLAGLEVPSYADTETTFDELQARIARTVEFLEGIREEQLDGAEERNVTLKVRGQEISFNGRDFLFGFALPNFFFHVTTAYAILRHNGVELGKMDFLGGA
3QTH Chain:A ((5-165))
-RIDLYIKHRDIFLKHLELLHKLIEKVED----SSLNESELLNARLVDDMFPFNVQAKIATNFALRACCPLSGKEYKELEGDIDSFCGLKTYVVTAIDYINKLSEPTLEQL-NLNVQDTAGFKEISMPASEYMSSFVLPNFFFHISMVYAIAKNNGVSVTKGDFDGIH
General information:
TITO was launched using:
RESULT:
Template:
3QTH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87529 for 1201 contacts (-72.9/contact) +
2D Compatibility (PS) -17348 + (NN) -4458 + (LL) 748
1D Compatibility (HY) -13600 + (ID) 2400
Total energy: -124587.0 ( -103.74 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_3QTH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QTH-query.scw
PDB file :
Tito_Scwrl_3QTH.pdb
: