Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVPNSVSYYRSASYSHVGMVRKVNEDASLDAP--------------EAGLWVVADGMGGHAAGDFVSSLIVDTLRRIPAASSL-PAYVGALRTGLAQVNERVRQEAGL-----------R-GVSVMGSTLVLLAARGNQASCLWAGDSRLYRLRGGVLEAISRDHSYVQELLDN------ALISEEEARHHPRANVVTRAVGVHE-Q----LELSEAALHV-LPGDSFLLCSDGLNKTADDSELRDVLSH------------------SDPYAVVRSLVHLGLTRGAPDNITALVVRAF |
3QN1 Chain:B ((13-327)) | -------IPLWGTVSIQG-NRSEMEDAFAVSPHFLKLPIKMLMTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIK-QVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPRGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QN1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146580 for 2013 contacts (-72.8/contact) +
2D Compatibility (PS) -24023 + (NN) -760 + (LL) 700
1D Compatibility (HY) 0 + (ID) 2450
Total energy: -173113.0 ( -86.00 by residue)
QMean score : 0.419
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