Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVDMFIKIG-----DVKGESKDKTHAEEIDVLAWSWGMSQSGSMHMGGGGGAGKVNVQDLSFTKYIDKSTPNLMMACSSGKHYPQAKLTIRKAGGENQVEYLIITLKEVLVSSVSTGGSGGEDRLTENVTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNVQA
3WX6 Chain:A ((7-168))
------LKVKGKTQGEIK-------------ILAFKNDYDMPARLQ--EGLTPAAAARGTITLTKEMDRSSPQFLQALGKREMMEEFEITI----------LFTYKFEKVLITHMDQYSP-------------IEEIKFTYSGYSLE-----IAGAANWTN------
General information:
TITO was launched using:
RESULT:
Template:
3WX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44166 for 712 contacts (-62.0/contact) +
2D Compatibility (PS) -11432 + (NN) -2041 + (LL) 2540
1D Compatibility (HY) -8400 + (ID) 850
Total energy: -64349.0 ( -90.38 by residue)
QMean score : 0.236
(partial model without unconserved sides chains):
PDB file :
Tito_3WX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WX6-query.scw
PDB file :
Tito_Scwrl_3WX6.pdb
: