Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MTLYRLHEADLEIPDA---WQDQSINIFKLPASGPAREASFVISRDASQGDAPFADYVARQLENA-EKQLPGFKLHKRWDINIHGHAAVL---------LDYQWQREGRDLMLRQVFIER------RPAVLITTLTTTPADLPHHEPAWKQAMQTLVPRPTPS
1YAX Chain:A ((1-153))
MDKTTFRLLRGESNLFYTLAKWENNKISV-ELPENLDMQSPTMTLIYD-ETGKLLWTQRNIPWLIKSIQPEWLKTNGFHEIETNVDATSTLLSEDHSAQEKLKEVREDDDDAEMTHSVAVNIYPATARMPQLTIVVVDTIPIEL----------KRSYMHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
1YAX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20136 for 832 contacts (-24.2/contact) +
2D Compatibility (PS) -14135 + (NN) -6437 + (LL) 816
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -44892.0 ( -53.96 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_1YAX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YAX-query.scw
PDB file :
Tito_Scwrl_1YAX.pdb
: